DBMI Publications

Murali A, Bhargava A, Wright ES. IDTAXA: a novel approach for accurate taxonomic classification of microbiome sequences. Microbiome. 2018 Sep;6:140. PMID:  30092815
Cai C, Cooper GF, Lu KN, Ma X, Xu S, Zhao Z, Chen Z, Xue Y, Lee AV, Clark N, Chen V, Lu S, Chen L, Yu L, Hochheiser HS, Jiang X, Wang QJ, Lu X. Systematic discovery of the functional impact of somatic genome alterations in individual tumors through tumor-specific causal inference. bioRxiv (2018). Doi: http://dx.doi.org/10.1101/329375.  
Zeng Z, Jiang X, Li X, Wells A, Luo Y, Neapolitan RE. Conjugated equine estrogen and medroxyprogesterone acetate are associated with decreased risk of breast cancer relative to bioidentical hormone therapy and controls. PLoS One. 2018 May 16;13(5):e0197064. doi: 10.1371/journal.pone.0197064. eCollection 2018. PMID: 29768475. PMCID: PMC5955567.
Camacho J, Medina Ch. AM, Landis-Lewis Z, Douglas G, Boyce R. Comparing a Mobile Decision Support System Versus the Use of Printed Materials for the Implementation of an Evidence-Based Recommendation: Protocol for Qualitative Evaluation. JMIR Res Protoc 2018;7(4):e104. doi: 10.2196/resprot.9827. PMID: 29653921. PMCID: PMC5924374.
Suresh S, Saladino RA, Fromkin J, Heineman E, McGinn T, Richichi R, Berger RP. Integration of physical abuse clinical decision support into the electronic health record at a Tertiary Care Children's Hospital. Journal of the American Medical Informatics Association, 2018; 25(7), 833-840. doi: 10.1093/jamia/ocy025.
Cao C, Wu H, Vasilatos SN, Chandran U, Qin Y, Wan Y, Oesterrich S, Davidson NE, Huang Y. HDAC5-LSD1 Axis Regulates Antineoplastic Effect of Natural HDAC Inhibitor Sulforaphane in Human Breast Cancer Cells. Int J Cancer. 2018 Apr 6. Doi: 10.1005/ijc.31419. [Epub ahead of print] PMID 29633255.
Jhon Camacho, Ana Maria Medina, Zach Landis-Lewis, Gerald Douglas, Richard Boyce.  Comparing a Mobile Decision Support System Versus the Use of Printed Materials for the Implementation of an Evidence-Based Recommendation: Protocol for a Qualitative Evaluation.  JMIR Research Protocols, Vol 7, No 4 (2018); April.   http://www.researchprotocols.org/2018/4/e105/
Shaikh N, Hoberman A, Hum SW, Alberty A, Muniz G, Kurs-Lasky M, Landsittel D, Shope T. Development and Validation of a Calculator for Estimating the Probability of Urinary Tract Infection in Young Febrile Children. JAMA Pediatr. 2018 Jun 1;172(6):550-556. doi: 10.1001/jamapediatrics.2018.0217. PMID: 29710324. PMCID: PMC6137527 [Available on 2019-04-16].
Pascal LE, Wang Y, Zhong M, Wang D, Chakka AB, Yang Z, Li F, Song Q, Rigatti LH, Chaparala S, Chandran U, Parwani AV, Wang Z. EAF2 and p53 Co-Regulate STAT3 Activation in Prostate Cancer. Neoplasia. 2018 Apr;20(4):351-363. doi: 10.1016/j.neo.2018.01.011. Epub 2018 Mar 6. PMID: 29518696. PMCID: PMC5909677.
Luthra S, Chandran U, Diergaarde B, Becich M, Lee AV, Neumann CA. Expression of reactive species related genes is associated with patient survival in luminal B breast cancer. Free Radic Biol Med. 2018 Mar 12. pii: S0891-5849(18)30114-X. doi: 10.1016/j.freeradbiomed.2018.03.011. [Epub ahead of print]. PMID: 2954507.
^