DBMI Publications

Frahm KA, Peffer ME, Zhang JY, Luthra S, Chakka AB, Couger MB, Chandran UR, Monaghan AP, DeFranco DB. Research Resource: The Dexamethasone Transcriptome in Hypothalamic Embryonic Neural Stem Cells. Mol Endocrinol. 2016 Jan;30(1):144-54. doi: 10.1210/me.2015-1258. PMID: 26606517. PMCID: PMC4695633.
Uppal R, Mandava G, Romagnoli KM, King AJ, Draper AJ, Handen AL, Fisher AM, Becich MJ, Dutta-Moscato J. How can we improve Science, Technology, Engineering, and Math education to encourage careers in Biomedical and Pathology Informatics? J Pathol Inform. 2016 Jan 29;7:2. doi: 10.4103/2153-3539.175375. eCollection 2016. PMID: 26955500. PMCID: PMC4763503.
Tseytlin E, Mitchell K, Legowski E, Corrigan J, Chavan G, Jacobson RS. NOBLE – Flexible concept recognition for large-scale biomedical natural language processing. BMC Bioinformatics 2016 17:32. PMID: 26763894 [PubMed - in process]  PMCID:  PMC4712516
Day RS. Want a letter? You write it for me. Science. 2016 Jan 8;351(6269):198. PMID: 26744407 DOI: 10.1126/science.351.6269.198
Ganapathiraju MK, Thahir M, Handen A, Sarkar SN, Sweet RA, Nimgaonkar VL, Loscher CE, Bauer EM, Chaparala S: Schizophrenia interactome with 504 novel protein–protein interactions. Npj Schizophrenia 2016, 2:16012. Link to Publication
Mathew L, Lott J, Isse K, Lesniak A, Landsittel D, Demetris A, Sun Y, Mercer D, Webber S, Zeevi A, Fisher R, Feingold B, and Turnquist H. Increased Expression of the IL-33 Receptor, ST2, Correlates with Pediatric Heart and Small Bowel Transplant Rejection. American Journal of Transplantation. 2016. 16(3):938-950.
Chandran UR, Luthra S, Santana-Santos L, Mao P, Kim SH, Minata M, Li J, Benos PV, DeWang M, Hu B, Cheng SY, Nakano I, Sobol RW. Gene expression profiling distinguishes proneural glioma stem cells from mesenchymal glioma stem cells. Genom Data. 2015 Sep 1;5:333-336.http://doi.org/10.1016/j.gdata.2015.07.007. PMID: 26251826. PMCID: PMC4523279.
Jacobson RS, Becich MJ, Bollag RJ, Chavan G, Dhir R, Corrigan J, Feldman M, Ganguly A, Gaudioso C, Legowski E, Maihle N, Mitchell K, Murphy M, Sakthivel M, Tseytlin E, Weaver J. A Federated Network for Translational Cancer Research Using Clinical Data and Biospecimens. Cancer Res. 2015;75(24):5194-201.doi: 10.1158/0008-5472.CAN-15-1973. Review. PMID: 26670560 PMCID: PMC4683415.
R. Ceschin, B. F. Kurland, S. R. Abberbock, B. M. Ellingson, H. Okada, R. I. Jakacki, I. F. Pollack, and A. Panigrahy, “Parametric Response Mapping of Apparent Diffusion Coefficient as an Imaging Biomarker to Distinguish Pseudoprogression from True Tumor Progression in Peptide-Based Vaccine Therapy for Pediatric Diffuse Intrinsic Pontine Glioma.,” AJNR. Am. J. Neuroradiol., Sep. 2015. PMID: 26338910 PMCID: PMC4644687 DOI: 10.3174/ajnr.A4428
Archer KJ, Dobbin K, Biswas S, Day RS, Wheeler DC, Wu H. (2015). Computer Simulation, Bioinformatics, and Statistical Analysis of Cancer Data and Processes. Cancer Informatics, 14 (Suppl 2), 247–251. PMID: 26380548. PMCID: PMC4559198. DOI: 10.4137/CIN.S32525.
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