Madhavi Ganapathiraju, PhD

Manoharan V, Ganapathariju M, Klein-Seetharaman J. BLMT Web Server: Interactive Language Technologies for Analogous Biological Data. Workshop on Ambient Intelligence and (Everyday) Life, Donostia, San-Sebastian, Spain, 2005.

Ganapathiraju M, Klein-Seetharaman J, Balakrishnan N, Reddy R. Characterization of Protein Secondary Structure using Latent Semantic Analysis. IEEE Signal Processing Magazine. 2004 May;21(3):78-87. doi: 10.1109/MSP.2004.1296545

Balakrishnan N, Reddy R, Ganapathiraju M, Gogineni H. Million Books to Web: Technological Challenges and Research Issues. Proc. Tamil Internet conference, pp 227-242, December 2004.

Jayaraman A, Sangani S, Ganapathiraju M, Balakrishnan N. OmSE: Tamil Search Engine. Proc. Tamil Internet conference, pp 23-29, December 2004.

Ganapathiraju M, Manoharan V, Klein-Seetharaman J. BLMT: Statistical sequence analysis using n-grams. J Appl Bioinformatics. 2004;3(2-3):193-200. doi: 10.2165/00822942-200403020-00013. PubMed PMID: 15693744.

Ganapathiraju M,  Balakrishnan N, Reddy R, Klein-Seetharaman J. Computational Biology and Language. Lecture Notes in Artificial Intelligence, LNCS/LNAI. 2004. 3345.

Ganapathiraju M, Weisser D, Reddy R, Klein-Seetharaman J. Yule value tables from Protein Datasets of different categories: emphasis on membrane proteins. Proc. SCI2004, Florida, USA, 2004.

Sivaraman B, Ganapathiraju M, Klein-Seetharaman J, Balakrishnan N, Reddy R. Extensions to Biological Language Modeling Toolkit (BLMT). BLC2003: Biological Language Conference, Pittsburgh USA, November 2003.

Ganapathiraju M, Balakrishnan N, Reddy R. Improving Recognition Accuracy on CVSD speech in mismatched conditions. WSEAS Transactions on Computers, Vol 2, Issue 4, October 2003.

Ganapathiraju M, Klein-Seetharaman J, Rosenfeld R, Carbonell J, Reddy R. Rare and frequent amino acid n-grams in whole-genome protein sequences. RECOMB'02: The Sixth Annual International Conference on Research in Computational Molecular Biology, Washington DC, USA, April, 2002.