Gregory Cooper, MD, PhD

Scoring Bayesian networks of mixed variables

Andrews B, Ramsey J, Cooper GF. Scoring Bayesian networks of mixed variables. International Journal of Data Science and Analytics (2018) 1-16. First Online 11 January 2018.

A Bayesian system to detect and characterize overlapping outbreaks.

Aronis JM, Millett NE, Wagner MW, Tsui F, Ye Y, Ferraro JP, Haug PJ, Gesteland PH, Cooper GF. A Bayesian system to detect and characterize overlapping outbreaks. Journal of Biomedical Informatics 2017 Sep;73:171-181. doi: 10.1016/j.jbi.2017.08.003. Epub 2017 Aug 7. PMID: 28797710 PMC5604259

Eye-tracking for clinical decision support: A method to capture automatically what physicians are viewing in the EMR

King AJ, Hochheiser H, Visweswaran S, Clermont G, Cooper GF. Eye-tracking for Clinical Decision Support: A Method to Capture Automatically What Physicians Are Viewing in the EMR. AMIA Jt Summits Transl Sci Proc. 2017 Jul 26;2017:512-521. eCollection 2017. PMID: 28815151. PMCID: PMC5543363.

The effects of natural language processing on cross-institutional portability of influenza case detection for disease surveillance

Ferraro JP, Ye Y, Gesteland PH, Haug PJ, Tsui F-C, Cooper GF, Van Bree R, Ginter T, Nowalk AJ, Wagner MM. The effects of natural language processing on cross-institutional portability of influenza case detection for disease surveillance. Appl Clin Inform. 2017 May 31;8(2):560-580. doi:10.4338/ACI-2016-12-RA-0211. PubMed PMID: 28561130.

A study of the transferability of influenza case detection systems between two large healthcare systems

Ye Y, Wagner MM, Cooper GF, Ferraro JP, Su H, Gesteland PH, Haug PJ, Millett NE, Aronis JM, Nowalk AJ, Ruiz VM, López Pineda A, Shi L, Van Bree R, Ginter T, Tsui F. A study of the transferability of influenza case detection systems between two large healthcare systems. PLoS One. 2017 Apr 5;12(4):e0174970. doi: 10.1371/journal.pone.0174970. eCollection 2017. PMID: 28380048 PMCID: PMC5381795

Precision Oncology Beyond Targeted Therapy: Combining Omics Data with Machine Learning Matches the Majority of Cancer Cells to Effective Therapeutics

Ding MQ, Chen L, Cooper GF, Young JD, Lu X. Precision Oncology Beyond Targeted Therapy: Combining Omics Data with Machine Learning Matches the Majority of Cancer Cells to Effective Therapeutics. Mol Cancer Res. 2017 Nov 13. pii: molcanres.0378.2017. doi: 10.1158/1541-7786.MCR-17-0378. [Epub ahead of print] PMID: 29133589

Automated influenza case detection for public health surveillance and clinical diagnosis using dynamic influenza prevalence method

Tsui F, Ye Y, Ruiz V, Cooper GF, Wagner MM. Automated influenza case detection for public health surveillance and clinical diagnosis using dynamic influenza prevalence method. J Public Health (Oxf). 2017 Oct 20:1-8. doi: 10.1093/pubmed/fdx141. [Epub ahead of print]. PMID: 29059331.

Binary classifier calibration using an ensemble of piecewise linear regression models

Naeini MP, Cooper GF. Binary classifier calibration using an ensemble of piecewise linear regression models. Journal of Knowledge and Information System 2018 Jan;54(1); 151-170. Doi:10.1007/s10115-017-1133-2. Epub 2017 Nov 17. PMID: 29606784 PMCID: PMC5875942

Discovery of causal models that contain latent variables through Bayesian scoring of independence constraints

Jabbari F, Ramsey J, Spirtes P, Cooper GF. Discovery of causal models that contain latent variables through Bayesian scoring of independence constraints. In: Proceeding of the European Conference on Machine Learning (2017).

A new method for estimating causal model learning accuracy. In: Workshop on Data Mining for Medical Informatics (DMMI)

Kummerfeld E, Cooper GF. A new method for estimating causal model learning accuracy. In: Workshop on Data Mining for Medical Informatics (DMMI) – Causal Inference for Health Data Analytics (2017).

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