Xinghua Lu, MD, PhD, MS

Richards*, AJ, Muller, B., Shotwell, M, Cowart, LA, Rohrer, B, and Lu, X (2010) Assessing the functional coherence of gene sets with metrics based on the Gene Ontology graph.  Bioinformatics, supplement issue for the Proceedings for the Intelligent Systems in Molecular Biology (ISMB) 2010 (19% acceptance) PMID: 20529941

Jin*, B., Strasburger, A., Laken, SJ., Kozel, FA., Johnson, KA., George, MS., and Lu, X. (2009) Feature selection for fMRI-based deception detection.  BMC Bioinformatics 10 (Suppl 9):S15 (Outstanding Paper Award at the AMIA Summit on Translational Bioinformatics) PMID: 19761569

Kozel, FA.,  Johnson, KA., Grenesko,EL., Laken, SJ., Kose, S, Lu, X., Pollina, D., Ryan, A and George, MS (2009) Functional MRI detection of deception after committing a mock sabotage crime.  J. Forensic Sciences, 54(1):220-31. PMID: 19067772

Zheng*, B. and Lu, X (2009) Application of semantic modeling in bioinformatics domain.  In: Data Management in Semantic Web, Ed. Jin, H. and Lv, Z,.  Nova Science Publishers, Inc.

Muller*, B., Richards, AJ., Jin, B., Lu, X. (2009) GOGrapher; A Python library for GO graph representation and analysis.  BMC Research Notes 2:122 PMID:19583843

Jin*, B and Lu, X (2009) Enhancing GO-graph-based multi-label classification using semantic-rich GO terms.   Proceedings of the Annual Meeting of the ISMB BioLINK Workshop 2009

Jin, B*., Muller*, B., Zhai, CX, and Lu, X (2008) Multi-label literature classification based on the Gene Ontology graph.  BMC Bioinformatics 9:525. PMID: 19063730

Chen, Y., Zheng*, B., Robbins, DH.,  Lewin, DN., Mikhitarian, K, Graham, A., Rumpp, L, Glenn, T, Gillanders, WE, Cole, DJ,  Lu, X, Hoffman, BJ. and Michael Mitas (2007) Accurate discrimination of pancreatic ductal adenocarcinoma and chronic focal pancreatitis using multi-marker expression data and samples obtained by minimally invasive fine needle aspiration. International Journal of Cancer, 120(7):1511. PMID: 17192896

Zheng*, B., and Lu, X. (2007)  Novel metrics for evaluating the functional coherence of protein groups via protein-semantic-network. Genome Biology 8:R153     [doi:10.1186/gb-2007-8-7-r153] PMID: 17672896

Lu, X., Zheng*, B., Velivelli, A. and  Zhai, C (2006) Enhancing text categorization with semantic-enriched representation and training data augmentation.  J Am Med Inform Assoc, 13(5):526-35. PMID: 16799127

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