Xia Jiang, PhD

Conjugated equine estrogen and medroxyprogesterone acetate are associated with decreased risk of breast cancer relative to bioidentical hormone therapy and controls.

Zeng Z, Jiang X, Li X, Wells A, Luo Y, Neapolitan RE. Conjugated equine estrogen and medroxyprogesterone acetate are associated with decreased risk of breast cancer relative to bioidentical hormone therapy and controls. PLoS One. 2018 May 16;13(5):e0197064. doi: 10.1371/journal.pone.0197064. eCollection 2018. PMID: 29768475. PMCID: PMC5955567.

Using natural language processing and machine learning to identify breast cancer local recurrence

Zeng Z, Espino S, Roy A, Li X, Khan SA, Clare SE, Jiang X, Neapolitan R, Luo Y. Using natural language processing and machine learning to identify breast cancer local recurrence. BMC Bioinformatics. 2018 Dec 28:19(Suppl 17):498. doi: 10.1186/s12859-018-2466-x. PMID: 30591037. PMCID: PMC6309052.

Modeling miRNA-mRNA interactions that cause phenotypic abnormality in breast cancer patients

Lee S, Jiang X. Modeling miRNA-mRNA interactions that cause phenotypic abnormality in breast cancer patients. PLOS One.2017 Aug 9;12(8):e1082666. doi: 10.1371/journal.pone.0182666. eCollection 2017. PMID: 28793339. PMCID: PMC5549916.

An algorithm for direct causal learning of influences on patient outcomes.

Rathnam C, Lee S, Jiang X. An algorithm for direct causal learning of influences on patient outcomes. Artif Intell Med. 2017 Jan; 75: 1-15. doi: 10.1016/j.artmed.2016.10.003. Epub 2016 Nov 5. PMID: 28363452. PMC ID: PMC5415921. 

An informatics research agenda to support precision medicine: seven key areas

Tenenbaum JD, Avillach P, Benhan-Hutchins M, Breitenstein MK, Crowgey EL, Hoffman MA, Jiang X, Madhavan S, Mattison JE, Nagarajan R, Ray B, Shin D, Visweswaran S, Zhao Z, Freimuth RR. An informatics research agenda to support precision medicine: seven key areas. J Am Med Inform Assoc. 2016 Jul;23(4):791-5. doi: 10.1093/jamia/ocv213. Epub 2016 Apr 23. PMID: 27107452. PMCID: PMC4926738.

Discovering causal interactions using Bayesian network scoring and information gain

Zeng Z, Jiang X, Neapolitan R. Discovering causal interactions using Bayesian network scoring and information gain. BMC Bioinformatics. 2016 May 26;17(1):221. doi: 10.1186/s12859-016-1084-8. PMID: 27230078. PMCID: PMC4880828.

Inferring causal molecular networks: empirical assessment through a community-bsed effort.

Hill SM, Heiser LM, Cokelaer T, Jiang X, et. al. Inferring causal molecular networks: empirical assessment through a community-bsed effort. Nat Methods. 2016 Apr;13(4):310-8. doi: 10.1038/nmeth.3773. Epub 2016 Feb 22. PMID: 26901648. PMCID: PMC4854847.

Computational methods for ubiquination site prediction using physicochemical properties of protein sequences

Cai B, Jiang X. Computational methods for ubiquination site prediction using physicochemical properties of protein sequences. BMC Bioinformatics. 2016 Mar 3;17:116. doi: 10.1186/s12859-016-0959-z. PMID: 26940649. PMCID: PMC4778322.

Pan-cancer analysis of TCGA data reveals notable signaling pathways

Neapolitan R, Horvath CM, Jiang X. Pan-cancer analysis of TCGA data reveals notable signaling pathways. BMC Cancer. 2015 Jul 14;15:516. doi: 10.1186/s12885-015-1484-6. PMID: 26169172. PMCID: PMC4501083.

LEAP: biomarker inference through learning and evaluating association patterns

Jiang X, Neapolitan RE. LEAP: biomarker inference through learning and evaluating association patterns. Genet Epidemiol. 2015 Mar;39(3):173-184. doi: 10.1002/gepi.21889. PMID: 25677188. PMCID: PMC4366363.

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