Publications for Madhavi Ganapathiraju, PhD












"Digital Library of India: a testbed for Indian language research",
N. Balakrishnan, Raj Reddy, Madhavi Ganapathiraju, Vamshi Ambati,
IEEE Technical Committee on Digital Libraries (TCDL) Bulletin, vol 3, issue 1, 2006.

"TelMore: Morphological Generator for Telugu Nouns and Verbs", Madhavi Ganapathiraju and Lori Levin, Proc. Second International Conference on Universal Digital Library, Vol Alexandria, Egypt, Nov 17-19, 2006.

"Multilingual Book Reader: Transliteration, Word-to-Word Translation and Full-text Translation",
Prashanth Balajapally, Phanindra Pydimarri, Madhavi Ganapathiraju, N. Balakrishnan, Raj Reddy,
VALA 2006: 13th Biennial Conference and Exhibition Conference of Victorian Association for Library Automation, Melbourne, Australia, February 8-10, 2006.

"Collaborative Discovery and Biological Language Modeling Interface",
Madhavi Ganapathiraju, Vijayalaxmi Manoharan, Raj Reddy and Judith Klein-Seetharaman,
Lecture Notes in Artificial Intelligence, LNCS/LNAI 3864, 2006.

"Retinitis pigmentosa associated with rhodopsin mutations: Correlation between phenotypic variability and molecular effects", Iannaccone A, D. Man, N. Waseem, BJ. Jennings, Madhavi Ganapathiraju, K. Gallaher, E. Reese, SS. Bhattacharya, J. Klein-Seetharaman, Vision Research, vol 46, issue 27, pp 4556-67, 2006.

"Comparison of stability predictions and simulated unfolding of rhodopsin structures", Oznur Tastan, Esther Yu, Madhavi Ganapathiraju, Anes Aref, AJ Rader and Judith Klein-Seetharaman, Photobiology and photochemistry, vol 63, issue 2, pp 351-363, 2006.


"BLMT Web Server: Interactive Language Technologies for Analogous Biological Data",
Vijayalaxmi Manoharan, Madhavi Ganapathiraju and Judith Klein-Seetharaman,
Workshop on Ambient Intelligence and (Everyday) Life, Donostia, San-Sebastian, Spain, 2005.

"Om: One tool for many (Indian) languages", Ganapathiraju Madhavi, Balakrishnan Mini, Balakrishnan N., Reddy Raj, Journal of Zhejiang University SCIENCE, Vol 6A, No. 11, pp 1348-1353, Oct 2005.


"Characterization of Protein Secondary Structure using Latent Semantic Analysis",
Madhavi Ganapathiraju, Judith Klein-Seetharaman, N. Balakrishnan and Raj Reddy,
IEEE Signal Processing Magazine, vol. 21, issue 3, May 2004.

"Yule value tables from Protein Datasets of different categories: emphasis on membrane proteins"[Invited Talk], Madhavi Ganapathiraju, Deborah Weisser, Raj Reddy and Judith Klein-Seetharaman, Proc. SCI2004, Florida, USA, 2004.

"Computational Biology and Language", Madhavi Ganapathiraju, N. Balakrishnan, Raj Reddy and Judith Klein-Seetharaman, Lecture Notes in Artificial Intelligence, LNCS/LNAI 3345, 2004.

"BLMT: Statistical sequence analysis using n-grams", Madhavi Ganapathiraju, Vijayalaxmi Manoharan and Judith Klein-Seetharaman, Applied Bioinformatics, vol. 3, issue 2, November 2004.



"Comparative n-gram analysis of whole-genome sequences" Madhavi Ganapathiraju, Deborah Weisser, Judith Klein-Seetharaman, Roni Rosenfeld, Jaime Carbonell and Raj Reddy, HLT'02: Human Language Technologies Conference, San Diego, March, 2002.

"Rare and frequent amino acid n-grams in whole-genome protein sequences", Madhavi Ganapathiraju, Judith Klein-Seetharaman, Roni Rosenfeld, Jaime Carbonell and Raj Reddy,  RECOMB'02: The Sixth Annual International Conference on Research in Computational Molecular Biology, Washington DC, USA, April, 2002.