DBMI Publications

H. Harkema, I. Roberts, R. Gaizauskas, M. Hepple. 2005. A Web Service for Biomedical Term Look-up. In: Comparative and Functional Genomics,  6(1-2):86-93. PMID: 18629294
Wagner MM, Tsui FC, Espino J, Hogan W, Hutman J, Hersh J, Neill D, Moore A, Parks G, Lewis C, Aller R. National Retail Data Monitor for public health surveillance. MMWR Morb Mortal Wkly Rep. 2004 Sep 24; 53 Suppl:40-2. PMID: 15714625
Wagner MM, Espino J, Tsui FC, Gesteland P, Chapman W, Ivanov O, Moore A, Wong W, Dowling J, Hutman J. Syndrome and outbreak detection using chief-complaint data--experience of the Real-Time Outbreak and Disease Surveillance project. MMWR Morb Mortal Wkly Rep. 2004 Sep 24;53 Suppl:28-31. PMID: 15714623
Lu, X., Zhai, C., Gopalakrishnan, V.,and Buchanan, B.G. (2004) Automatic annotation of protein motif function with Gene Ontology terms.  BMC Bioinformatics 5:122. PMID: 15345032
H. Harkema, R. Gaizauskas, M. Hepple, N. Davis, Y. Guo, A. Roberts, I. Roberts. A Large-Scale Resource for Storing and Recognizing Technical Terminology. In: Proceedings of the Fourth International Conference on 9/3/2010 3 Language Resources and Evaluation (LREC 2004). M.T. Lino, M.F. Xavier, F. Ferreira, R. Costa, R. Silva (eds.). Lisbon, Portugal. 2004, pp. 83-86.
Yoo C, Cooper GF. An evaluation of a system that recommends microarray experiments to perform to discover gene-regulation pathways. Artificial Intelligence in Medicine 31 (2004) 169-182.  PMID:  1529293
"Characterization of Protein Secondary Structure using Latent Semantic Analysis", Madhavi Ganapathiraju, Judith Klein-Seetharaman, N. Balakrishnan and Raj Reddy, IEEE Signal Processing Magazine, vol. 21, issue 3, May 2004.
Dash D, Cooper GF. Model averaging for prediction with discrete Bayesian networks. Journal of Machine Learning Research (2004) 1177-1203. 
Visweswaran S, Cooper GF. Instance-specific Bayesian model averaging for classification. In: Advances in Neural Information Processing Systems (NIPS 2004) (Dec 2004) 1449-56.
"Million Books to Web: Technological Challenges and Research Issues", N. Balakrishnan, Raj Reddy, Madhavi Ganapathiraju and Hemant Gogineni, Proc. Tamil Internet conference, pp 227-242, December 2004.