DBMI Publications

Cai B, Jiang X. Novel Artificial Neural Network Method for Biomedical Prediction based on Matrix Pseudo-Inversion. Journal of Biomedical Informatics. 2014 Apr; 48:114-21. doi: 10.1016/j.jbi.2013.12.009.
Stokes ME, Barmada MM, Kamboh MI, Visweswaran S. The application of network label propagation to rank biomarkers in genome-wide Alzheimer's data. BMC Genomics. 2014 Apr 14;15(1):282. PMID: 24731236
Jiang X, Cai B, Xue D, Lu X, Cooper GF, Neapolitan RE. A comparative analysis of methods for predicting clinical outcomes using high-dimensional genomic datasets. Journal of the American Medical Informatics Association (2014). Oct;21(e2):e312-9. doi: 10.1136/amiajnl-2013-002358. Epub 2014 Apr 15.  PMID: 24737607 PMC4173174
Bhavnani SK, Dang B, Caro M, Bellala G, Visweswaran S, Asuncion M, Divekar R. Heterogeneity within and across pediatric pulmonary infections: From bipartite networks to at-risk subphenotypes. In: Proceedings of the 2014 AMIA Summit on Translational Bioinformatics (Apr 2014).
Dutta-Moscato J, Gopalakrishnan V, Lotze MT, Becich MJ. Creating a pipeline of talent for informatics: STEM initiative for high school students in computer science, biology, and biomedical informatics. J Pathol Inform. 2014 Mar 28;5(1):12. doi: 10.4103/2153-3539.129448. eCollection 2014. PMID: 24860688. PMCID: PMC4030307.
Sikora MJ, Cooper KL, Bahreini A, Luthra S, Wang G, Chandran UR, Davidson NE, Dabbs DJ, Welm AL, Oesterreich S. (2014). Invasive lobular carcinoma cell lines are characterized by unique estrogen-mediated gene expression patterns and altered tamoxifen response. Cancer Research, 74(5), 1463–1474. http://doi.org/10.1158/0008-5472.CAN-13-2779 PMID: 24425047 PMCID: PMC3955299
Amin W, Srinivasan M, Song SY, Parwani AV, Becich MJ. Use of automated image analysis in evaluation of mesothelioma Tissue Microarray (TMA) from National Mesothelioma Virtual Bank. Pathol Res Pract. 2014 Feb;210(2):79-82. doi: 10.1016/j.prp.2013.09.002. Epub 2013 Nov 14. PMID: 24359722.
Menon PG, Morris L, Staines M, Lima J, Lee DC, Gopalakrishnan V. Novel MRI-derived quantitative biomarker for cardiac function applied to classifying ischemic cardiomyopathy within a Bayesian rule learning framework. Proceedings of the SPIE Medical Imaging 2014; February 15-20, 2014; San Diego, CA, USA. 2014.
Jiang X, Xue D, Brufsky AM, Khan SA, Neapolitan RE. A new method for predicting patient survivorship using efficient Bayesian network learning. Cancer Informatics. 2014; 13 (2):47-57. PMCID: PMC3928477. PMID: 24558297[PubMed]. doi: 10.4137/CIN.S13053.
Aflakparast M, Salimi H, Gerami A, Dubé M-P, Visweswaran S, Masoudi-Nejad A. Cuckoo search epistasis: A new method for exploring significant genetic interactions. Heredity, 2014 Feb 19; doi: 10.1038/hdy.2014.4. PMID: 24549111
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