DBMI Publications

Eric Strobl, Shyam Visweswaran. Markov boundary discovery with ridge regularized linear models. Journal of Causal Inference. ISSN (Online) 2193-3685, ISSN (Print) 2193-3677, DOI: 10.1515/jci-2015-0011, November 2015
Rasmussen-Torvik LJ, Baldridge AS, Pacheco JA, Aufox SA, Kim KY, Silverstein JC, Denham EW, Hungness E, Smith ME, Greenland P.  rs4771122 Predicts Multiple Measures of Long-Term Weight Loss After Bariatric Surgery. Obes Surg. 2015 Nov;25(11):2225-9.  PMID: 26337695 PMCID: PMC4598314 DOI: 10.1007/s11695-015-1872-7
Mungall CJ, Washington NL, Nguyen-Xuan J, Condit C, Smedley D, Köhler S, Groza T, Shefchek K., Hochheiser H, Robinson PN, Lewis SE and Haendel MA. (2015), Use of Model Organism and Disease Databases to Support Matchmaking for Human Disease Gene Discovery. Human Mutation, 36: 979–984. doi:10.1002/humu.22857  PMID:  26269093
Wright ES. DECIPHER: harnessing local sequence context to improve protein multiple sequence alignment. BMC Bioinformatics. 2015 Oct 6;16:322. doi: 10.1186/s12859-015-0749-z. PMID: 26445311. PMCID: PMC4595117.
Maraganore DM, Frigerio R, Kazmi N, Meyers SL, Sefa M, Walters SA, Silverstein JC. Quality improvement and practice-based research in neurology using the electronic medical record. Neurol Clin Pract. 2015 Oct;5(5):419–429. PMCID: PMC4634157
Strange C, Senior RM, Sciurba F, O'Neal S, Morris A, Wisniewski SR, Bowler R, Hochheiser HS, Becich MJ, Zhang Y, Leader JK, Methé BA, Kaminski N, Sandhaus RA; GRADS Alpha-1 Study Group. Rationale and Design of the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis Study. Alpha-1 Protocol.  Ann Am Thorac Soc. 2015 Oct; 12(10): 1551-60. doi: 10.1513/AnnalsATS.201503-143OC. PMID: 26153726. PMCID: PMC4627425.
Moller DR, Koth LL, Maier LA, Morris A, Drake W, Rossman M, Leader JK, Collman RG, Hamzeh N, Sweiss NJ, Zhang Y, O'Neal S, Senior RM, Becich M, Hochheiser HS, Kaminski N, Wisniewski SR, Gibson KF; GRADS Sarcoidosis Study Group. Rationale and Design of the Genomic Research in Alpha-1 Antitrypsin Deficiency and Sarcoidosis (GRADS) Study. Sarcoidosis Protocol. Ann Am Thorac Soc. 2015 Oct: 12(10): 1561-71. doi: 10.1513/AnnalsATS.201503-172OT  PMID: 26193069. PMCID: PMC4627423.
B. Paquette, J. K. Votava-Smith, R. Ceschin, A. C. Nagasunder, H. A. Jackson, S. Blüml, J. L. Wisnowski, and A. Panigrahy, “Abnormal Development of Thalamic Microstructure in Premature Neonates with Congenital Heart Disease.,” Pediatr. Cardiol., Jan. 2015. PMID: 25608695 PMCID: PMC4433609 DOI: 10.1007/s00246-015-1106-8
John J. Frazier, Corey D. Stein, Eugene Tseytlin, Tanja Bekhuis. Building a gold standard to construct search filters: A case study with biomarkers for oral cancer. J Med Libr Assoc. 2015 Jan;103(1):22-30. doi: 10.3163/1536-5050.103.1.005.
Batal I, Cooper G, Fradkin D, Harrison J, Moerchen F, Hauskrecht M. An efficient pattern mining approach for event detection in multivariate temporal data. The Journal of Knowledge and Information Systems (2015) 1-36 [PubMed – in progress].