DBMI Publications

Li Y, Klena NT, Gabriel GC, Liu X, Kim AJ, Lemke K, Chen Y, Chatterjee B, Devine W, Damerla RR, Chang C, Yagi H, San Agustin JT, Thahir M, Anderton S, Lawhead C, Vescovi A, Pratt H, Morgan J, Haynes L, Smith CL, Eppig JT, Reinholdt L, Francis R, Leatherbury L, Ganapathiraju MK, Tobita K, Pazour GJ, Lo CW. Global genetic analysis in mice unveils central role for cilia in congenital heart disease. Nature. 2015 Mar 25. doi: 10.1038/nature14269. [Epub ahead of print] PubMed PMID: 25807483.
Tsui F-C, Adaptive Hospital Readmission Prediction System (AHRPS), Innovation in Healthcare Technology 2014, Pittsburgh, Feb. 14, 2014
Cooper GF, Villamarin R, Rich Tsui FC, Millett N, Espino JU, Wagner MM. A method for detecting and characterizing outbreaks of infectious disease from clinical reports. J Biomed Inform. 2015 Feb; 53:15-26.  doi: 10.1016/j.jbi.2014.08.011. Epub 2014 Aug 30.  PMID: 25181466. PMCID: PMC4441330.
J. L. Wisnowski, R. C. Ceschin, S. Y. Choi, V. J. Schmithorst, M. J. Painter, M. D. Nelson, S. Blüml, and A. Panigrahy, “Reduced thalamic volume in preterm infants is associated with abnormal white matter metabolism independent of injury.,” Neuroradiology, Feb. 2015. PMID: 25666231 PMCID: PMC4405472 DOI: 10.1007/s00234-015-1495-7
R. Ceschin, A. Panigrahy, and V. Gopalakrishnan, “Sfdm: Open-source software for temporal analysis and visualization of brain tumor diffusion mr using serial functional diffusion mapping,” Cancer Inform., vol. 14, pp. 1–9, 2015. PMID: 25673970 PMCID: PMC4315050 DOI: 10.4137/CIN.S17293
Day RS.  What Tumor Dynamics Modeling Can Teach us About Exploiting the Stem-Cell View for Better Cancer Treatment. Cancer Informatics. 2015 Feb 24;14(Suppl 2):25-36. doi: 10.4137/CIN.S17294. eCollection 2015. PMID: 25780337. PMCID: PMC434585
Neapolitan RE, Jiang X. Study of integrated heterogeneous data reveals prognostic power of gene expression for breast cancer survival. PLoS ONE. 2015; 10 (2): DOI: 10.1371/journal.pone.0117658. PMID: 25723490. PMCID: PMC4344205.
Naeini MP, Cooper GF, Hauskrecht M. Obtaining well calibrated probabilities using Bayesian binning. In: Proceedings of the Conference of the Association for the Advancement of Artificial Intelligence (2015) Jan;2015:2901-2907. PMID: 25927013 PMC4410090.
Kevin McDade, Uma Chandran, Roger Day.  Improving Cancer Gene Expression Data Quality through a TCGA Data-Driven Evaluation of Identifier Filtering.  Cancer Informatics 2015 Dec 16;14:149-161.  DOI: 10.4137/CIN.S33076
Kuziemsky CE, Nøhr C, Borycki EM, Kushniruk AW, Senathirajah Y. Understanding the Context of Patient Safety Through The Lenses of Three IMIA Working Groups. Stud Health Technol Inform. 2015;218:40615. PMID: 26262545.