DBMI Publications

Hochheiser H, Ning Y, Hernandez A, Horn, JR, Jacobson R, Boyce RD. Using Nonexperts for Annotating Pharmacokinetic Drug-Drug Interaction Mentions in Product Labeling: A Feasibility Study. JMIR Res Protoc. 2016 Apr 11;5(2):e40. doi: 10.2196/resprot.5028. PMID: 27066806 PMCID: PMC4844909.
Hill SM, et al. Inferring causal molecular networks: Empirical assessment through a community-based effort. Nature Methods (2016) Apr; 13(4):310-318. doi: 10.1038/nmeth.3773. PMID: 26901648 PMCID: PMC4854847
Pineda AL, Ogoe HA, Balasubramanian JB, Rangel Escareño C, Visweswaran S, Herman JG, Gopalakrishnan V. On Predicting lung cancer subtypes using 'omic' data from tumor and tumor-adjacent histologically-normal tissue. BMC Cancer. 2016 Mar 4;16:184. doi: 10.1186/s12885-016-2223-3. PMID:  26944944  PMCID:  PMC4778315  DOI: 10.1186/s12885-016-2223-3.
Shyam Visweswaran, Jessica Tenenbaum,  Ramkiran Gouripeddi at  Informatics Implementation - 2016 Joint Summits, March 2016
Concha-Benavente F, Srivastava RM, Trivedi S, Lei Y, Chandran U, Seethala RR, Freeman GJ, Ferris RL. Identification of the Cell-Intrinsic and -Extrinsic Pathways Downstream of EGFR and IFNy That Induce PD-L1 Expression in Head and Neck Cancer. Cancer Res. 2016 Mar 1;76(5):1031-43. doi: 10.1158/0008-5472.CAN-15-2001.  PMID:26676749. PMCID: PMC4775348.
Batmanghelich N, Dalca A, Quon G, Sabuncu M, Golland P. Probabilistic Modeling of Imaging, Genetics and the Diagnosis. IEEE Transactions on Medical Imaging (TMI), pp 1765-1779, 2016. PMID: 26886973 DOI: 10.1109/TMI.2016.2527784
Romagnoli KM, Boyce RD, Empey PE, Adams S, Hochheiser H. Bringing clinical pharmacogenomics information to pharmacists: A qualitative study of information needs and resource requirements. Int J Med Inform. 2016 Feb;86:54-61. doi: 10.1016/j.ijmedinf.2015.11.015. Epub 2015 Nov 30. PMID: 26725696. PMCID: PMC4720137.
Fisher A, Herbert MI, Douglas GP. Understanding the dispensary workflow at the Birmingham Free Clinic: A proposed framework for an informatics intervention. BMC Health Serv Res. 2016 Feb 19; 16:69. PMCID: PMC4759722. doi: 10.1186/s12913-016-1308-7
Thurston RC, Chang Y, Mitchell EB, Jennings JR, Landsittel DP, Santoro N, von Känel R, Matthews KA. Menopausal Hot Flashes and Carotid Intima Media Thickness Among Midlife Women. Stroke, 2016;47(12), 2910-2915. PMID: 27834746 PMCID: PMC5134903 [Available on 2017-12-01] DOI: 10.1161/STROKEAHA.116.014674
Dunn M, Josbeno D, Sturdevant M, Rachakonda V, Ganesh S, Schmotzer A, Kallenborn E, Behari J, Landsittel D, DiMartini A, Delitto A. Frailty as tested by gait speed is an independent risk factor for cirrhosis complications that require hospitalization. American Journal of Gastroenterology. 2016;111(12):1768-1775.  PMID: 27575708  DOI: 10.1038/ajg.2016.336