Bain KT, Holmes HM, Beers MH, Maio V, Handler SM, Pauker SG. Discontinuing medications: A novel approach for revising the prescribing stage of the medication-use process. Journal of the American Geriatrics Society. 2008;56(10):1946-1952. PMID:18771457 NIHMS: 102035 PMCID: PMC Journal – In process.
DBMI Publications
Discontinuing medications: A novel approach for revising the prescribing stage of the medication-use process
Touchscreen clinical workstations at point-of-care: a paradigm shift in electronic medical record design for developing countries
McKay MV, Douglas GP. Touchscreen clinical workstations at point-of-care: a paradigm shift in electronic medical record design for developing countries. 5th IET International Seminar on Appropriate Healthcare Technologies for Developing Countries. 2008/12213.
A comparison of data captured at point of care versus data captured retrospectively
Douglas G, McKay M, Bwanali M, Gadabu O, Mumba S, et al. A comparison of data captured at point of care versus data captured retrospectively. AMIA Annu Symp Proc 2008;934. PMID: 18999092
Establishing a nationwide emergency department-based syndromic surveillance system for better public health responses in Taiwan
Wu TS, Shih FY, Yen MY, Wu JS, Lu SW, Chang KC, Hsiung C, Chou JH, Chu YT, Chang H, Chiu CH, Tsui FC, Wagner MM, Su IJ, King CC. Establishing a nationwide emergency department-based syndromic surveillance system for better public health responses in Taiwan. BMC Public Health. 2008 Jan 18;8:18. PMID: 18201388
Establishing a nationwide emergency department-based syndromic surveillance system for better public health responses in Taiwan
Wu TS, Shih FY, Yen MY, Wu JS, Lu SW, Chang KC, Hsiung C, Chou JH, Chu YT, Chang H, Chiu CH, Tsui FC, Wagner MM, Su IJ, King CC. Establishing a nationwide emergency department-based syndromic surveillance system for better public health responses in Taiwan. BMC Public Health. 2008 Jan 18;8:18. PMID: 18201388.
Analysis of a failed clinical decision support system for management of congestive heart failure
Wadhwa R, Fridsma DB, Saul MI, Penrod LE, Visweswaran S, Cooper GF, Chapman W. Analysis of a failed clinical decision support system for management of congestive heart failure. Annual Symposium Proceedings/AMIA Symposium 2008. 773-777. PMCID:PMC2655961
Hierarchical explanation of inference in Bayesian networks that represent a population of independent agents
Sutovsky P and Cooper GF. Hierarchical explanation of inference in Bayesian
networks that represent a population of independent agents. In: Proceedings of the 18th European Conference on Artificial Intelligence (2008) 214-218.
Conditional Anomaly Detection Methods for Patient-Management Alert Systems
Valko M, Cooper G, Seybert A, Visweswaran S, Hauskrecht M. Conditional Anomaly Detection Methods for Patient-Management Alert Systems. In: Proceedings of the Workshop on Machine Learning in Health Care Applications of the 25th International Conference on Machine Learning(2008).
TMpro: Transmembrane Helix Prediction Using Amino Acid Properties and Latent Semantic Analysis
Madhavi Ganapathiraju, N. Balakrishnan, Raj Reddy and Judith Klein-Seetharaman, BMC Bioinformatics, vol 9, Suppl 1, 2008.
Patient safety culture: A review of the nursing home literature and recommendations for practice
Bonner AF, Castle NG,Perera S, Handler SM. Patient safety culture: A review of the nursing home literature and recommendations for practice [Review]. Annals of Long-Term Care: Clinical Care and Aging. 2008;16(3):18-22.
Geriatrics
Starner C, Gray S, Guay D, Hajjar E, Handler S, Hanlon J. Geriatrics. In: Dipiro J, Talbet R, Yee G, Matzke G, Wells B, Posey L, editors.Pharmacotherapy: A Pathophysiological Approach. Seventh ed. Columbus, OH: McGraw Hill; 2008:57-66
A Baseline System for the i2b2 Obesity Challenge
H. Harkema, H. Piwowar, S. Amizadeh, J. Dowling, J. Ferraro, P. Haug, W. Chapman. A Baseline System for the i2b2 Obesity Challenge. In: Proceedings of the Second i2b2 Workshop on Challenges in Natural Language Processing for Clinical Data, American Medical Informatics Association Annual Symposium 2008. Washington, D.C. 2008.
Accessibility of Physical Activity Promotion Websites For Persons With Visual Impairments
Jerome GJ, Durm J,Hochheiser H, Appel LJ. Accessibility of Physical Activity Promotion Websites For Persons With Visual Impairments. 2nd International Congress on Physical Activity and Public Health; Amsterdam, the Netherlands. 2008.
Using gaze-tracking data and mixture distribution analysis to support a holistic model for the detection of cancers on mammograms
Mello-Thoms C, Ganott M, Sumkin J, Hakim C, Britton C, Wallace L, Hardesty L. Different search strategies and similar decision outcomes: How can experts agree in the decisions they make when reading digital mammograms? In Digital Mammography 2008, edited by E Krupinski, Springer Lecture Notes in Computer Science 2008; pp 212-219.
The Importance of Pathology Informatics in Translational Research.
Mohanty SK, Parwani AV, Crowley RS, Winters S, Becich MJ. The Importance of Pathology Informatics in Translational Research. Adv Anat Patholo 2007 Sept;14(5):320-322. PUBMED ID: 17717431
Members of the Shared Pathology Informatics Network. A system for sharing routine surgical pathology specimens across institutions: the Shared Pathology Informatics Network.
Drake TA, Braun J, Marchevsky A, Kohane IS, Fletcher C, Chueh H, Beckwith B, Berkowicz D, Kuo F, Zeng QT, Balis U, Holzbach A, McMurry A, Gee CE, McDonald CJ, Schadow G, Davis M, Hattab EM, Blevins L, Hook J, Becich MJ, Crowley RS, Taube SE, Berman J; Members of the Shared Pathology Informatics Network. A system for sharing routine surgical pathology specimens across institutions: the Shared Pathology Informatics Network. Hum Pathol. 2007 Aug;38(8):1212-25. Epub 2007 May 8. PMID: 17490722
Effect of lean method implementation in the histopathology section of an anatomic pathology laboratory.
Laframboise WA, Scalise D, Stoodley P, Graner SR, Guthrie RD, Magovern JA, Becich MJ. Effect of lean method implementation in the histopathology section of an anatomic pathology laboratory. J Clin Pathol. 2007 Aug 3; [Epub ahead of print]. PMID: 17675533
Synoptic Tool for reporting of Hematological and Lymphoid neoplasms based on World Health Organization classification and College of American Pathologists checklist.
Mohanty SK, Piccoli AL, Devine LJ, Patel AA, Gross WC, Winters SB, Becich MJ, Parwani AV. Synoptic Tool for reporting of Hematological and Lymphoid neoplasms based on World Health Organization classification and College of American Pathologists checklist. BMC Cancer. 2007 Jul 31;7(1):144 [Epub ahead of print]. PMID: 17672904
Lessons Learned from the Shared Pathology Informatics Network (SPIN): A Scalable Network for Translational Research and Public Health.
Becich MJ. Lessons Learned from the Shared Pathology Informatics Network (SPIN): A Scalable Network for Translational Research and Public Health. J Am Med Inform Assoc.2007 Jul-Aug;14: 534-535. PBCID: PMC2244892
Modeling Drug Mechanism Knowledge Using Evidence and Truth Maintenance
Boyce R., Collins C., Horn J., Kalet I., "Modeling Drug Mechanism Knowledge Using Evidence and Truth Maintenance," IEEE Transactions on Information Technology in Biomedicine, Volume 11(4) 2007, Page(s):386 - 397. PMID: 17674621.
A Systematic Review of the Performance Characteristics of Clinical Event Monitor Signals Used to Detect Adverse Drug Events in the Hospital Setting
Handler SM, Altman RL, Perera S, Hanlon JT, Studenski SA, Saul MI, Fridsma DB. A Systematic Review of the Performance Characteristics of Clinical Event Monitor Signals Used to Detect Adverse Drug Events in the Hospital Setting. Journal of the American Medical Informatics Association. 2007:14(4):451-458. PMID:17460130 PMCID:PMC2244905
A Novel Cross-Disciplinary Multi-Institute Approach to Translational Cancer Research: Lessons Learned from Pennsylvania Cancer Alliance Bioinformatics Consortium (PCABC)
Patel AA, Gilbertson GR, Showe LC, London JW, Ross E, Ochs MF, Carver J, Lazarus A, Parwani AV, Dhir R, Beck JR, Liebman M, Garcia FU, Prichard J, Wilkerson M, Herberman RB, Becich MJ and the PCABC. A Novel Cross-Disciplinary Multi-Institute Approach to Translational Cancer Research: Lessons Learned from Pennsylvania Cancer Alliance Bioinformatics Consortium (PCABC). Cancer Informatics 2007:3, 255-274 (2007). PMID: 19455246 e-pub = http://la-press.com/journals.php?pa=abstract&content_id=272.
The Cooperative Prostate Cancer Tissue Resource. Practical aspects of planning, building, and interpreting tissue microarrays: The Cooperative Prostate Cancer Tissue Resource experience.
Kajdacsy-Balla A, Geynisman JM, Macias V, Setty S, Nanaji NM, Berman JJ, Dobbin K, Melamed J, Kong X, Bosland M, Orenstein J, Bayerl J, Becich MJ, Dhir R, Datta MW; The Cooperative Prostate Cancer Tissue Resource. Practical aspects of planning, building, and interpreting tissue microarrays: The Cooperative Prostate Cancer Tissue Resource experience. J Mol Histol. 2007 May;38(2):113-121. Epub 2007 Feb 21. PMID: 17318343
Cardiac fibroblasts influence cardiomyocyte phenotype in vitro.
Laframboise WA, Scalise D, Stoodley P, Graner SR, Guthrie RD, Magovern JA, Becich MJ. Cardiac fibroblasts influence cardiomyocyte phenotype in vitro. Am J Physiol Cell Physiol. 2007 May;292(5):C1799-1808. PMID: 17229813
Gene expression profiles of prostate cancer reveal involvement of multiple molecular pathways in the metastatic process.
Chandran UR, Ma C, Dhir R, Bisceglia M, Lyons-Weiler M, Liang W, Michalopoulos G, Becich MJ, Monzon FA. Gene expression profiles of prostate cancer reveal involvement of multiple molecular pathways in the metastatic process. BMC Cancer. 2007 Apr 12;7:64. PMID: 17430594
DBMI Graduate Students
